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HBV Target gene Detail Information

> CCDC32 Gene Search Result


Gene Information
Gene Name CCDC32
Gene ID 90416
Gene Full Name coiled-coil domain containing 32
Gene Alias C15orf57
Transcripts ENSG00000128891
Virus HBV
Gene Type protein coding
HPA Location Info Nuclear speckles;Vesicles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9BV29
HGNC ID HGNC:28295
OMIM ID 618941
PharmGKB ID PA162378234
Target gene [CCDC32] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002521 chr15 234 16 6 256 View
1010457 chr15 9 2 1 12 View
1012831 chr15 4 2 6 View
1400606 chr15 234 16 6 256 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of CCDC32 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
CCDC32 expression: Low -> High
Lollipop of CCDC32 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of CCDC32 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).