HTLV1 Target gene Detail Information

> CCDC149 Gene Search Result


Gene Information
Gene Name CCDC149
Gene ID 91050
Gene Full Name coiled-coil domain containing 149
Transcripts ENSG00000181982
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoli;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q6ZUS6
HGNC ID HGNC:25405
VEGA ID OTTHUMG00000160308
String ID 9606.ENSP00000425715
PharmGKB ID PA162381560
Target gene [CCDC149] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009382 chr4 13 17 7 37 View
6018617 chr4 2 3 4 9 View
6021107 chr4 6 6 View
6022629 chr4 5 5 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).