HIV Target gene Detail Information

> CCDC137 Gene Search Result

Gene Information

Gene Name	CCDC137
Gene ID	339230
Gene Full Name	coiled-coil domain containing 137
Gene Alias	RaRF
Transcripts	ENSG00000185298
Virus	HIV
Gene Type	protein coding
HPA Location Info	Mitotic chromosome;Nucleoli;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q6PK04
HGNC ID	HGNC:33451
VEGA ID	OTTHUMG00000178064
OMIM ID	614271
String ID	9606.ENSP00000329360
PharmGKB ID	PA162381422

Target gene [CCDC137] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008643	chr17	14			14	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CCDC137 expression and immune infiltrating cell level correlation result in HIV+ samples
CCDC137 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).