HIV Target gene Detail Information

> CCDC134 Gene Search Result


Gene Information
Gene Name CCDC134
Gene ID 79879
Gene Full Name coiled-coil domain containing 134
Transcripts ENSG00000100147
Virus HIV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted secreted proteins
Uniport_ID Q9H6E4
HGNC ID HGNC:26185
VEGA ID OTTHUMG00000151262
OMIM ID 618788
String ID 9606.ENSP00000255784
PharmGKB ID PA162381361
Target gene [CCDC134] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4005316 chr22 34 34 View
4012976 chr22 2 2 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of CCDC134 expression and immune infiltrating cell level correlation result in HIV+ samples
CCDC134 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).