HTLV1 Target gene Detail Information

> CAST Gene Search Result


Gene Information
Gene Name CAST
Gene ID 831
Gene Full Name calpastatin
Gene Alias BS-17; PLACK
Transcripts ENSG00000153113
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;Endoplasmic reticulum;Plasma membrane;
HPA Protein Class Info Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID P20810
HGNC ID HGNC:1515
VEGA ID OTTHUMG00000128413
OMIM ID 114090
String ID 9606.ENSP00000379157
Drugbank ID BE0000904
PharmGKB ID PA26098
Target gene [CAST] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6011772 chr5 25 25 View
6011773 chr5 25 25 View
6020136 chr5 7 7 View
6020137 chr5 7 7 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).