HIV Target gene Detail Information

> CASC3 Gene Search Result


Gene Information
Gene Name CASC3
Gene ID 22794
Gene Full Name CASC3, exon junction complex subunit
Gene Alias BTZ; MLN51
Transcripts ENSG00000108349
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear membrane;
HPA Protein Class Info Cancer-related genes, Predicted intracellular proteins, Transporters
Uniport_ID O15234
HGNC ID HGNC:17040
VEGA ID OTTHUMG00000133323
OMIM ID 606504
String ID 9606.ENSP00000264645
PharmGKB ID PA134948596
Target gene [CASC3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4009827 chr17 5 5 10 View
4009930 chr17 7 3 10 View
4010567 chr17 7 1 8 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).