HPV Target gene Detail Information

> CASC21 Gene Search Result

Gene Information

Gene Name	CASC21
Gene ID	103021164
Gene Alias	CARLO2; CARLo-2; LINC01244
Virus	HPV
Gene Type	ncRNA
HGNC ID	HGNC:49836
OMIM ID	617702
lncRNASNP2 ID	NONHSAG051250.2

Target gene [CASC21] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5000965	chr8	46	15	2	63	View
5001423	chr8	22	9	3	34	View
5001784	chr8	18	4	1	23	View
5003630	chr8	2			2	View
5003631	chr8	2			2	View
5003632	chr8	2			2	View
5003633	chr8	2			2	View
5400073	chr8	20	14	7	41	View
5401793	chr8	20	14	7	41	View
5401816	chr8	20	14	7	41	View
5403331	chr8	57	1		58	View
5404594	chr8	143	8	5	156	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).