HIV Target gene Detail Information

> CAPRIN1 Gene Search Result

Gene Information

Gene Name	CAPRIN1
Gene ID	4076
Gene Full Name	cell cycle associated protein 1
Gene Alias	M11S1; GPIAP1; RNG105; GPIP137; GRIP137; p137GPI
Transcripts	ENSG00000135387
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q14444
HGNC ID	HGNC:6743
VEGA ID	OTTHUMG00000166248
OMIM ID	601178
String ID	9606.ENSP00000340329
PharmGKB ID	PA30508

Target gene [CAPRIN1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4003245	chr11	45	16	3	64	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CAPRIN1 expression and immune infiltrating cell level correlation result in HIV+ samples
CAPRIN1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of CAPRIN1 expression and immune infiltrating cell level correlation result in HIV+ samples
CAPRIN1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).