HBV Target gene Detail Information

> CAPN13 Gene Search Result

Gene Information

Gene Name	CAPN13
Gene ID	92291
Gene Full Name	calpain 13
Transcripts	ENSG00000162949
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q6MZZ7
HGNC ID	HGNC:16663
VEGA ID	OTTHUMG00000152053
OMIM ID	610228
String ID	9606.ENSP00000295055
PharmGKB ID	PA134931170

Target gene [CAPN13] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1007501	chr2	24	3		27	View
1007502	chr2	24	3		27	View
1007503	chr2	24	3		27	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of CAPN13 expression and immune infiltrating cell level correlation result in HBV+ samples
CAPN13 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).