HTLV1 Target gene Detail Information

> CAPN12 Gene Search Result


Gene Information
Gene Name CAPN12
Gene ID 147968
Gene Full Name calpain 12
Transcripts ENSG00000182472
Virus HTLV1
Gene Type protein coding
HPA Location Info Focal adhesion sites;Nucleoplasm;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q6ZSI9
HGNC ID HGNC:13249
VEGA ID OTTHUMG00000182525
OMIM ID 608839
String ID 9606.ENSP00000331636
PharmGKB ID PA134863447
Target gene [CAPN12] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008679 chr19 36 6 42 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).