HPV Target gene Detail Information

> CALN1 Gene Search Result


Gene Information
Gene Name CALN1
Gene ID 83698
Gene Full Name calneuron 1
Gene Alias CABP8
Transcripts ENSG00000183166
Virus HPV
Gene Type protein coding
HPA Location Info Vesicles;Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9BXU9
HGNC ID HGNC:13248
VEGA ID OTTHUMG00000023787
OMIM ID 607176
String ID 9606.ENSP00000378690
PharmGKB ID PA26045
Target gene [CALN1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001432 chr7 21 5 8 34 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).