HBV Target gene Detail Information

> CALCOCO2 Gene Search Result


Gene Information
Gene Name CALCOCO2
Gene ID 10241
Gene Full Name calcium binding and coiled-coil domain 2
Gene Alias NDP52
Transcripts ENSG00000136436
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Vesicles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q13137
HGNC ID HGNC:29912
VEGA ID OTTHUMG00000160505
OMIM ID 604587
String ID 9606.ENSP00000398523
PharmGKB ID PA143485407
Target gene [CALCOCO2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007161 chr17 16 14 30 View
1009234 chr17 12 5 17 View
1009620 chr17 5 10 15 View
1011255 chr17 5 4 9 View
1401157 chr17 5 4 9 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).