HBV Target gene Detail Information

> CACNB2 Gene Search Result


Gene Information
Gene Name CACNB2
Gene ID 783
Gene Full Name calcium voltage-gated channel auxiliary subunit beta 2
Gene Alias MYSB; CAVB2; CACNLB2
Transcripts ENSG00000165995
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Disease related genes, FDA approved drug targets, Predicted intracellular proteins, Transporters
Uniport_ID Q08289
HGNC ID HGNC:1402
VEGA ID OTTHUMG00000017764
OMIM ID 600003
String ID 9606.ENSP00000320025
Drugbank ID BE0002354; BE0008715; BE0009739; BE0004902
PharmGKB ID PA88
Target gene [CACNB2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003301 chr10 22 65 60 147 View
1004264 chr10 26 44 17 87 View
1009940 chr10 4 10 14 View
1012203 chr10 4 3 7 View
1013422 chr10 5 5 View
1400054 chr10 13 1 14 View
1400141 chr10 3 3 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CACNB2 expression and immune infiltrating cell level correlation result in HBV+ samples
CACNB2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).