HBV Target gene Detail Information

> CACNA2D3 Gene Search Result


Gene Information
Gene Name CACNA2D3
Gene ID 55799
Gene Full Name calcium voltage-gated channel auxiliary subunit alpha2delta 3
Gene Alias HSA272268
Transcripts ENSG00000157445
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Gene Function Suppressor gene
Uniport_ID Q8IZS8
HGNC ID HGNC:15460
VEGA ID OTTHUMG00000158580
OMIM ID 606399
String ID 9606.ENSP00000419101
Drugbank ID BE0003563; BE0004902
PharmGKB ID PA26013
Target gene [CACNA2D3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1016006 chr3 2 2 View
1018401 chr3 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CACNA2D3 expression and immune infiltrating cell level correlation result in HBV+ samples
CACNA2D3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).