HBV Target gene Detail Information

> C7orf50 Gene Search Result

Gene Information

Gene Name	C7orf50
Gene ID	84310
Gene Full Name	chromosome 7 open reading frame 50
Gene Alias	YCR016W
Transcripts	ENSG00000146540
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoli;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9BRJ6
HGNC ID	HGNC:22421
VEGA ID	OTTHUMG00000151477
String ID	9606.ENSP00000380286
PharmGKB ID	PA162380546

Target gene [C7orf50] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1005024	chr7	29	17	17	63	View
1008534	chr7	11	9		20	View
1008535	chr7	12	8		20	View
1012523	chr7	5	1		6	View
1403585	chr7	5	1		6	View
1403586	chr7	29	17	17	63	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of C7orf50 expression and immune infiltrating cell level correlation result in HBV+ samples
C7orf50 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).