HIV Target gene Detail Information

> C6orf62 Gene Search Result

Gene Information

Gene Name	C6orf62
Gene ID	81688
Gene Full Name	chromosome 6 open reading frame 62
Gene Alias	XTP12; dJ30M3.2; Nbla00237
Transcripts	ENSG00000112308
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9GZU0
HGNC ID	HGNC:20998
VEGA ID	OTTHUMG00000014361
String ID	9606.ENSP00000367359
PharmGKB ID	PA134946342

Target gene [C6orf62] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005991	chr6	26	2		28	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of C6orf62 expression and immune infiltrating cell level correlation result in HIV+ samples
C6orf62 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).