HTLV1 Target gene Detail Information

> C4orf51 Gene Search Result


Gene Information
Gene Name C4orf51
Gene ID 646603
Gene Full Name chromosome 4 open reading frame 51
Transcripts ENSG00000237136
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID C9J302
HGNC ID HGNC:37264
VEGA ID OTTHUMG00000161367
String ID 9606.ENSP00000391404
PharmGKB ID PA165663246
Target gene [C4orf51] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000945 chr4 455 85 154 694 View
6012087 chr4 11 9 4 24 View
6027790 chr4 1 1 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of C4orf51 expression and immune infiltrating cell level correlation result in HTLV1+ samples
C4orf51 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).