HIV Target gene Detail Information

> C2orf88 Gene Search Result

Gene Information

Gene Name	C2orf88
Gene ID	84281
Gene Full Name	chromosome 2 open reading frame 88
Gene Alias	smAKAP
Transcripts	ENSG00000187699
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9BSF0
HGNC ID	HGNC:28191
VEGA ID	OTTHUMG00000154361
OMIM ID	615117
String ID	9606.ENSP00000345107
PharmGKB ID	PA164717227

Target gene [C2orf88] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4012642	chr2	2	2		4	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of C2orf88 expression and immune infiltrating cell level correlation result in HIV+ samples
C2orf88 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).