HTLV1 Target gene Detail Information

> C2orf81 Gene Search Result


Gene Information
Gene Name C2orf81
Gene ID 388963
Gene Full Name chromosome 2 open reading frame 81
Gene Alias hCG40743
Transcripts ENSG00000284308
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoli fibrillar center;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
HGNC ID HGNC:34350
VEGA ID OTTHUMG00000164184
String ID 9606.ENSP00000290390
PharmGKB ID PA162379643
Target gene [C2orf81] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000050 chr2 3457 1659 1251 6367 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of C2orf81 expression and immune infiltrating cell level correlation result in HTLV1+ samples
C2orf81 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).