HBV Target gene Detail Information

> C2CD2L Gene Search Result


Gene Information
Gene Name C2CD2L
Gene ID 9854
Gene Full Name C2CD2 like
Gene Alias DLNB23; TMEM24
Transcripts ENSG00000172375
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;Nucleoplasm;Cytosol;Nuclear membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID O14523
HGNC ID HGNC:29000
VEGA ID OTTHUMG00000166167
OMIM ID 617582
String ID 9606.ENSP00000338885
PharmGKB ID PA162379049
Target gene [C2CD2L] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1019599 chr11 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of C2CD2L expression and immune infiltrating cell level correlation result in HBV+ samples
C2CD2L expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).