HIV Target gene Detail Information

> C1orf162 Gene Search Result

Gene Information

Gene Name	C1orf162
Gene ID	128346
Gene Full Name	chromosome 1 open reading frame 162
Transcripts	ENSG00000143110
Virus	HIV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;Nucleoplasm;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q8NEQ5
HGNC ID	HGNC:28344
VEGA ID	OTTHUMG00000011750
String ID	9606.ENSP00000344218
PharmGKB ID	PA142672413

Target gene [C1orf162] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008800	chr1	1	13		14	View
4011429	chr1	2	5		7	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of C1orf162 expression and immune infiltrating cell level correlation result in HIV+ samples
C1orf162 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).