HBV Target gene Detail Information

> C1R Gene Search Result


Gene Information
Gene Name C1R
Gene ID 715
Gene Full Name complement C1r
Gene Alias EDSPD1
Transcripts ENSG00000288512
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;Predicted to be secreted;
HPA Protein Class Info Disease related genes, Enzymes, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID P00736
HGNC ID HGNC:1246
VEGA ID OTTHUMG00000168149
OMIM ID 613785
String ID 9606.ENSP00000438615
Drugbank ID BE0002093
PharmGKB ID PA25635
Target gene [C1R] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002192 chr12 306 3 11 320 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of C1R expression and immune infiltrating cell level correlation result in HBV+ samples
C1R expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).