HTLV1 Target gene Detail Information

> C17orf80 Gene Search Result


Gene Information
Gene Name C17orf80
Gene ID 55028
Gene Full Name chromosome 17 open reading frame 80
Gene Alias MIG3; HLC-8; SPEP1
Transcripts ENSG00000141219
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoplasm;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9BSJ5
HGNC ID HGNC:29601
VEGA ID OTTHUMG00000178417
String ID 9606.ENSP00000351937
PharmGKB ID PA143485404
Target gene [C17orf80] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008973 chr17 37 3 40 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).