HBV Target gene Detail Information

> C16orf86 Gene Search Result


Gene Information
Gene Name C16orf86
Gene ID 388284
Gene Full Name chromosome 16 open reading frame 86
Transcripts ENSG00000159761
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q6ZW13
HGNC ID HGNC:33755
VEGA ID OTTHUMG00000150527
String ID 9606.ENSP00000384117
PharmGKB ID PA162378445
Target gene [C16orf86] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000278 chr16 2871 202 77 3150 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of C16orf86 expression and immune infiltrating cell level correlation result in HBV+ samples
C16orf86 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).