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HBV Target gene Detail Information

> C12orf71 Gene Search Result


Gene Information
Gene Name C12orf71
Gene ID 728858
Gene Full Name chromosome 12 open reading frame 71
Transcripts ENSG00000214700
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID A8MTZ7
HGNC ID HGNC:34452
VEGA ID OTTHUMG00000169274
String ID 9606.ENSP00000413728
PharmGKB ID PA162378036
Target gene [C12orf71] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005146 chr12 52 2 6 60 View
1005147 chr12 52 2 6 60 View
1005150 chr12 52 2 6 60 View
1005154 chr12 52 2 6 60 View
1005156 chr12 52 2 6 60 View
1005157 chr12 52 2 6 60 View
1005158 chr12 52 2 6 60 View
1005159 chr12 52 2 6 60 View
1005161 chr12 52 2 6 60 View
1006381 chr12 34 1 4 39 View
1012708 chr12 4 1 1 6 View
1012717 chr12 4 1 1 6 View
1012720 chr12 4 1 1 6 View
1012752 chr12 4 1 1 6 View
1012779 chr12 4 1 1 6 View
1012790 chr12 4 1 1 6 View
1012811 chr12 4 1 1 6 View
1012843 chr12 4 1 1 6 View
1012846 chr12 4 1 1 6 View
1012859 chr12 4 1 1 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of C12orf71 expression and immune infiltrating cell level correlation result in HBV+ samples
C12orf71 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).