HIV Target gene Detail Information

> BRCC3 Gene Search Result

Gene Information

Gene Name	BRCC3
Gene ID	79184
Gene Full Name	BRCA1/BRCA2-containing complex subunit 3
Gene Alias	C6.1A; BRCC36; CXorf53
Transcripts	ENSG00000185515
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Uniport_ID	P46736
HGNC ID	HGNC:24185
VEGA ID	OTTHUMG00000022658
OMIM ID	300617
String ID	9606.ENSP00000358474
Drugbank ID	BE0008996
PharmGKB ID	PA134922847

Target gene [BRCC3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4011818	chrX	2		4	6	View
4012381	chrX	2	3		5	View
4014583	chrX	1	1		2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of BRCC3 expression and immune infiltrating cell level correlation result in HIV+ samples
BRCC3 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of BRCC3 expression and immune infiltrating cell level correlation result in HIV+ samples
BRCC3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).