HIV Target gene Detail Information

> BCL2L13 Gene Search Result


Gene Information
Gene Name BCL2L13
Gene ID 23786
Gene Full Name BCL2 like 13
Gene Alias MIL1; BCL-RAMBO; Bcl2-L-13
Transcripts ENSG00000099968
Virus HIV
Gene Type protein coding
HPA Location Info Mitochondria;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9BXK5
HGNC ID HGNC:17164
VEGA ID OTTHUMG00000150088
String ID 9606.ENSP00000480836
PharmGKB ID PA134912159
Target gene [BCL2L13] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000028 chr22 1900 204 154 2258 View
4004332 chr22 23 22 1 46 View
4012751 chr22 4 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of BCL2L13 expression and immune infiltrating cell level correlation result in HIV+ samples
BCL2L13 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of BCL2L13 expression and immune infiltrating cell level correlation result in HIV+ samples
BCL2L13 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).