HBV Target gene Detail Information

> BBS7 Gene Search Result

Gene Information

Gene Name	BBS7
Gene ID	55212
Gene Full Name	Bardet-Biedl syndrome 7
Gene Alias	BBS2L1
Transcripts	ENSG00000138686
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q8IWZ6
HGNC ID	HGNC:18758
VEGA ID	OTTHUMG00000133076
OMIM ID	607590
String ID	9606.ENSP00000264499
PharmGKB ID	PA134923753

Target gene [BBS7] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1007418	chr4	27			27	View
1013567	chr4	3	2		5	View
1013789	chr4	3	1		4	View
1013790	chr4	3	1		4	View
1017349	chr4		1		1	View
1019737	chr4				0	View
1400696	chr4	3	1		4	View
1400697	chr4	27			27	View
1400698	chr4	3	1		4	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of BBS7 expression and immune infiltrating cell level correlation result in HBV+ samples
BBS7 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).