HIV Target gene Detail Information

> BASP1 Gene Search Result

Gene Information

Gene Name	BASP1
Gene ID	10409
Gene Full Name	brain abundant membrane attached signal protein 1
Gene Alias	CAP23; NAP22; CAP-23; NAP-22
Transcripts	ENSG00000176788
Virus	HIV
Gene Type	protein coding
HPA Location Info	Plasma membrane;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Transporters
Gene Function	Suppressor gene
Uniport_ID	P80723
HGNC ID	HGNC:957
VEGA ID	OTTHUMG00000131061
OMIM ID	605940
String ID	9606.ENSP00000319281
PharmGKB ID	PA25261

Target gene [BASP1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4007464	chr5	19			19	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of BASP1 expression and immune infiltrating cell level correlation result in HIV+ samples
BASP1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of BASP1 expression and immune infiltrating cell level correlation result in HIV+ samples
BASP1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).