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HBV Target gene Detail Information

> BAHCC1 Gene Search Result


Gene Information
Gene Name BAHCC1
Gene ID 57597
Gene Full Name BAH domain and coiled-coil containing 1
Gene Alias BAHD2
Transcripts ENSG00000266074
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;
HPA Protein Class Info Predicted intracellular proteins
HGNC ID HGNC:29279
VEGA ID OTTHUMG00000184171
OMIM ID 617646
String ID 9606.ENSP00000462154
PharmGKB ID PA128394719
Target gene [BAHCC1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001489 chr17 354 243 65 662 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of BAHCC1 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
BAHCC1 expression: Low -> High
Lollipop of BAHCC1 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of BAHCC1 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of BAHCC1 expression and immune infiltrating cell level correlation result in HBV+ samples
BAHCC1 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).