HTLV1 Target gene Detail Information

> BAGE2 Gene Search Result

Gene Information

Gene Name	BAGE2
Gene ID	85319
Gene Alias	CT2.2
Virus	HTLV1
Gene Type	ncRNA
HGNC ID	HGNC:15723
OMIM ID	617776
PharmGKB ID	PA25243

Target gene [BAGE2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6011126	chr21	21	7		28	View
6017968	chr21	6	4		10	View
6019608	chr21	8			8	View
6022622	chr21	4	1		5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of BAGE2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
BAGE2 expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of BAGE2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
BAGE2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).