HBV Target gene Detail Information

> B4GALT3 Gene Search Result


Gene Information
Gene Name B4GALT3
Gene ID 8703
Gene Full Name beta-1,4-galactosyltransferase 3
Gene Alias beta4Gal-T3
Transcripts ENSG00000158850
Virus HBV
Gene Type protein coding
HPA Location Info Golgi apparatus;Cytosol;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID O60512
HGNC ID HGNC:926
VEGA ID OTTHUMG00000034348
OMIM ID 604014
String ID 9606.ENSP00000480428
PharmGKB ID PA25225
Target gene [B4GALT3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012174 chr1 7 7 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of B4GALT3 expression and immune infiltrating cell level correlation result in HBV+ samples
B4GALT3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).