HPV Target gene Detail Information

> B3GNT9 Gene Search Result

Gene Information

Gene Name	B3GNT9
Gene ID	84752
Gene Full Name	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
Transcripts	ENSG00000237172
Virus	HPV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;Nucleoli fibrillar center;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q6UX72
HGNC ID	HGNC:28714
VEGA ID	OTTHUMG00000173315
String ID	9606.ENSP00000400157
PharmGKB ID	PA164716431

Target gene [B3GNT9] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5300213	chr16	2513	257	343	3113	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE40774 (GEO)	Head and neck squamous cell carcinoma	134	Head and neck Squamous cell carcinomas GLOTTIC LARYNX (EBV-)(2), Head and neck Squamous cell carcinomas HYPOPHARYNX (EBV-)(9), Head and neck Squamous cell carcinomas ORAL CAVITY (EBV-)(23), Head and neck Squamous cell carcinomas ORAL CAVITY (EBV+)(2), Head and neck Squamous cell carcinomas OROPHARYNX (EBV-)(22), Head and neck Squamous cell carcinomas OROPHARYNX (EBV+)(54), Head and neck Squamous cell carcinomas OTHER (EBV+)(1), Head and neck Squamous cell carcinomas SUBGLOTTIC LARYNX (EBV-)(1), Head and neck Squamous cell carcinomas SUPRAGLOTTIC (EBV-)(19), Squamous cell carcinomas SUPRAGLOTTIC (EBV+)(1)
GSE138080 (GEO)	Cervical intraepithelial neoplasia	25	Normal (10), Cervical intraepithelial neoplasia (HPV+)(15)
HNSC (TCGA)	Head and Neck squamous cell carcinoma	566	Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE40774
HeatMap of cell type fractions in all samples	Lollipop of B3GNT9 expression and immune infiltrating cell level correlation result in HPV+ samples
B3GNT9 expression: Low -> High

> Dataset: GSE138080
HeatMap of cell type fractions in all samples	Lollipop of B3GNT9 expression and immune infiltrating cell level correlation result in HPV+ samples
B3GNT9 expression: Low -> High

> Dataset: HNSC
HeatMap of cell type fractions in all samples	Lollipop of B3GNT9 expression and immune infiltrating cell level correlation result in HPV+ samples
B3GNT9 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).