HIV Target gene Detail Information

> AVL9 Gene Search Result

Gene Information

Gene Name	AVL9
Gene ID	23080
Gene Full Name	AVL9 cell migration associated
Gene Alias	KIAA0241
Transcripts	ENSG00000105778
Virus	HIV
Gene Type	protein coding
HPA Location Info	Endoplasmic reticulum;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q8NBF6
HGNC ID	HGNC:28994
VEGA ID	OTTHUMG00000152929
OMIM ID	612927
String ID	9606.ENSP00000315568
PharmGKB ID	PA164716408

Target gene [AVL9] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001221	chr7	157	15	20	192	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of AVL9 expression and immune infiltrating cell level correlation result in HIV+ samples
AVL9 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of AVL9 expression and immune infiltrating cell level correlation result in HIV+ samples
AVL9 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).