HIV Target gene Detail Information

> ATXN2 Gene Search Result

Gene Information

Gene Name	ATXN2
Gene ID	6311
Gene Full Name	ataxin 2
Gene Alias	ATX2; SCA2; TNRC13
Transcripts	ENSG00000204842
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	Q99700
HGNC ID	HGNC:10555
VEGA ID	OTTHUMG00000133475
OMIM ID	601517
String ID	9606.ENSP00000366843
PharmGKB ID	PA34968

Target gene [ATXN2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000776	chr12	34	23	227	284	View
4001326	chr12	146	15	18	179	View
4001502	chr12	143	12	1	156	View
4001547	chr12	26	69	57	152	View
4001863	chr12	122	4		126	View
4002516	chr12	89	2		91	View
4003518	chr12		33	27	60	View
4005354	chr12	22	4	7	33	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).