HTLV1 Target gene Detail Information

> ATRNL1 Gene Search Result


Gene Information
Gene Name ATRNL1
Gene ID 26033
Gene Full Name attractin like 1
Gene Alias ALP; bA338L11.1; bA454H24.1
Transcripts ENSG00000107518
Virus HTLV1
Gene Type protein coding
HPA Location Info Mitochondria;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5VV63
HGNC ID HGNC:29063
VEGA ID OTTHUMG00000019096
OMIM ID 612869
String ID 9606.ENSP00000347152
PharmGKB ID PA134961599
Target gene [ATRNL1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000994 chr10 17 314 322 653 View
6010212 chr10 20 12 32 View
6012049 chr10 13 8 3 24 View
6023259 chr10 4 4 View
6033121 chr10 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).