HPV Target gene Detail Information

> ATRNL1 Gene Search Result


Gene Information
Gene Name ATRNL1
Gene ID 26033
Gene Full Name attractin like 1
Gene Alias ALP; bA338L11.1; bA454H24.1
Transcripts ENSG00000107518
Virus HPV
Gene Type protein coding
HPA Location Info Mitochondria;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5VV63
HGNC ID HGNC:29063
VEGA ID OTTHUMG00000019096
OMIM ID 612869
String ID 9606.ENSP00000347152
PharmGKB ID PA134961599
Target gene [ATRNL1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004088 chr10 1 1 View
5200333 chr10 0 View
5300210 chr10 4 4 View
5300211 chr10 35 6 41 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).