HIV Target gene Detail Information

> ATRN Gene Search Result

Gene Information

Gene Name	ATRN
Gene ID	8455
Gene Full Name	attractin
Gene Alias	MGCA; DPPT-L
Transcripts	ENSG00000088812
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Predicted to be secreted;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Plasma proteins, Predicted membrane proteins, Predicted secreted proteins
Uniport_ID	O75882
HGNC ID	HGNC:885
VEGA ID	OTTHUMG00000031746
OMIM ID	603130
String ID	9606.ENSP00000262919
PharmGKB ID	PA25178

Target gene [ATRN] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4006239	chr20	21	3	2	26	View
4008348	chr20		15		15	View
4010584	chr20	7	1		8	View
4015344	chr20		1		1	View
4016000	chr20				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ATRN expression and immune infiltrating cell level correlation result in HIV+ samples
ATRN expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ATRN expression and immune infiltrating cell level correlation result in HIV+ samples
ATRN expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).