HBV Target gene Detail Information

> ATP8B1 Gene Search Result


Gene Information
Gene Name ATP8B1
Gene ID 5205
Gene Full Name ATPase phospholipid transporting 8B1
Gene Alias BRIC; FIC1; ICP1; PFIC; ATPIC; PFIC1
Transcripts ENSG00000081923
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Plasma membrane;Nuclear bodies;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID O43520
HGNC ID HGNC:3706
VEGA ID OTTHUMG00000180255
OMIM ID 602397
String ID 9606.ENSP00000445359
PharmGKB ID PA265
Target gene [ATP8B1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000930 chr18 869 189 208 1266 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ATP8B1 expression and immune infiltrating cell level correlation result in HBV+ samples
ATP8B1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).