HBV Target gene Detail Information

> ATP2C2 Gene Search Result


Gene Information
Gene Name ATP2C2
Gene ID 9914
Gene Full Name ATPase secretory pathway Ca2+ transporting 2
Gene Alias SPCA2
Transcripts ENSG00000064270
Virus HBV
Gene Type protein coding
HPA Location Info Focal adhesion sites;Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted membrane proteins, Transporters
Uniport_ID O75185
HGNC ID HGNC:29103
VEGA ID OTTHUMG00000176737
OMIM ID 613082
String ID 9606.ENSP00000397925
Drugbank ID BE0010424
PharmGKB ID PA162377204
Target gene [ATP2C2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004045 chr16 65 24 8 97 View
1004492 chr16 51 15 13 79 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ATP2C2 expression and immune infiltrating cell level correlation result in HBV+ samples
ATP2C2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).