HBV Target gene Detail Information

> ATP2B2 Gene Search Result


Gene Information
Gene Name ATP2B2
Gene ID 491
Gene Full Name ATPase plasma membrane Ca2+ transporting 2
Gene Alias PMCA2; PMCA2a; PMCA2i
Transcripts ENSG00000157087
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Plasma proteins, Predicted membrane proteins, Transporters
Uniport_ID Q01814
HGNC ID HGNC:815
VEGA ID OTTHUMG00000128679
OMIM ID 108733
String ID 9606.ENSP00000353414
Drugbank ID BE0010391
PharmGKB ID PA25108
Target gene [ATP2B2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014548 chr3 1 2 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ATP2B2 expression and immune infiltrating cell level correlation result in HBV+ samples
ATP2B2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).