HBV Target gene Detail Information

> ATP13A5 Gene Search Result


Gene Information
Gene Name ATP13A5
Gene ID 344905
Gene Full Name ATPase 13A5
Transcripts ENSG00000187527
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q4VNC0
HGNC ID HGNC:31789
VEGA ID OTTHUMG00000156101
OMIM ID 619119
String ID 9606.ENSP00000341942
PharmGKB ID PA134952038
Target gene [ATP13A5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013695 chr3 2 1 1 4 View
1403984 chr3 2 1 1 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ATP13A5 expression and immune infiltrating cell level correlation result in HBV+ samples
ATP13A5 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).