HTLV1 Target gene Detail Information

> ATP11C Gene Search Result


Gene Information
Gene Name ATP11C
Gene ID 286410
Gene Full Name ATPase phospholipid transporting 11C
Gene Alias ATPIG; ATPIQ; HACXL
Transcripts ENSG00000101974
Virus HTLV1
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q8NB49
HGNC ID HGNC:13554
VEGA ID OTTHUMG00000022538
OMIM ID 300516
String ID 9606.ENSP00000332756
PharmGKB ID PA25103
Target gene [ATP11C] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6025109 chrX 3 3 View
6028587 chrX 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO) HTLV-1 associated myelopathy 35 Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of ATP11C expression and immune infiltrating cell level correlation result in HTLV1+ samples
ATP11C expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of ATP11C expression and immune infiltrating cell level correlation result in HTLV1+ samples
ATP11C expression: Low -> High

> Dataset: GSE29332

HeatMap of cell type fractions in all samples Lollipop of ATP11C expression and immune infiltrating cell level correlation result in HTLV1+ samples
ATP11C expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).