HIV Target gene Detail Information

> ATG2B Gene Search Result

Gene Information

Gene Name	ATG2B
Gene ID	55102
Gene Full Name	autophagy related 2B
Gene Alias	C14orf103
Transcripts	ENSG00000066739
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins, Transporters
Uniport_ID	Q96BY7
HGNC ID	HGNC:20187
VEGA ID	OTTHUMG00000149933
OMIM ID	616226
String ID	9606.ENSP00000353010
PharmGKB ID	PA162377102

Target gene [ATG2B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005783	chr14	3	26		29	View
4300072	chr14	12	81	61	154	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ATG2B expression and immune infiltrating cell level correlation result in HIV+ samples
ATG2B expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ATG2B expression and immune infiltrating cell level correlation result in HIV+ samples
ATG2B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).