HBV Target gene Detail Information

> ATAD2 Gene Search Result


Gene Information
Gene Name ATAD2
Gene ID 29028
Gene Full Name ATPase family, AAA domain containing 2
Gene Alias ANCCA; CT137; PRO2000
Transcripts ENSG00000156802
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q6PL18
HGNC ID HGNC:30123
VEGA ID OTTHUMG00000165090
OMIM ID 611941
String ID 9606.ENSP00000287394
PharmGKB ID PA134895566
Target gene [ATAD2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007548 chr8 13 13 26 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ATAD2 expression and immune infiltrating cell level correlation result in HBV+ samples
ATAD2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).