HBV Target gene Detail Information

> ASPSCR1 Gene Search Result


Gene Information
Gene Name ASPSCR1
Gene ID 79058
Gene Full Name ASPSCR1, UBX domain containing tether for SLC2A4
Gene Alias TUG; ASPL; ASPS; RCC17; UBXD9; UBXN9; ASPCR1
Transcripts ENSG00000169696
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Plasma membrane;Vesicles;
HPA Protein Class Info Cancer-related genes, Disease related genes, Predicted intracellular proteins
Gene Function Oncogene
Uniport_ID Q9BZE9
HGNC ID HGNC:13825
VEGA ID OTTHUMG00000178438
OMIM ID 606236
String ID 9606.ENSP00000306625
PharmGKB ID PA25058
Target gene [ASPSCR1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013633 chr17 5 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ASPSCR1 expression and immune infiltrating cell level correlation result in HBV+ samples
ASPSCR1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).