HBV Target gene Detail Information

> ASB12 Gene Search Result


Gene Information
Gene Name ASB12
Gene ID 142689
Gene Full Name ankyrin repeat and SOCS box containing 12
Transcripts ENSG00000198881
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8WXK4
HGNC ID HGNC:19763
VEGA ID OTTHUMG00000021705
OMIM ID 300891
String ID 9606.ENSP00000355195
PharmGKB ID PA134937084
Target gene [ASB12] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1019598 chrX 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ASB12 expression and immune infiltrating cell level correlation result in HBV+ samples
ASB12 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).