HTLV1 Target gene Detail Information

> ARPP19 Gene Search Result


Gene Information
Gene Name ARPP19
Gene ID 10776
Gene Full Name cAMP regulated phosphoprotein 19
Gene Alias ENSAL; ARPP16; ARPP-16; ARPP-19
Transcripts ENSG00000128989
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID P56211
HGNC ID HGNC:16967
VEGA ID OTTHUMG00000172677
OMIM ID 605487
String ID 9606.ENSP00000455625
PharmGKB ID PA165478498
Target gene [ARPP19] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010863 chr15 27 2 29 View
6016084 chr15 11 2 13 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of ARPP19 expression and immune infiltrating cell level correlation result in HTLV1+ samples
ARPP19 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).