HIV Target gene Detail Information

> ARPC1A Gene Search Result

Gene Information

Gene Name	ARPC1A
Gene ID	10552
Gene Full Name	actin related protein 2/3 complex subunit 1A
Gene Alias	Arc40; SOP2L; HEL-68; SOP2Hs; HEL-S-307
Transcripts	ENSG00000241685
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cell Junctions;Cytosol;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q92747
HGNC ID	HGNC:703
VEGA ID	OTTHUMG00000192204
OMIM ID	604220
String ID	9606.ENSP00000262942
PharmGKB ID	PA24997

Target gene [ARPC1A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4010511	chr7	9			9	View
4013495	chr7	3			3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ARPC1A expression and immune infiltrating cell level correlation result in HIV+ samples
ARPC1A expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ARPC1A expression and immune infiltrating cell level correlation result in HIV+ samples
ARPC1A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).