HBV Target gene Detail Information

> ARL13B Gene Search Result

Gene Information

Gene Name	ARL13B
Gene ID	200894
Gene Full Name	ADP ribosylation factor like GTPase 13B
Gene Alias	JBTS8; ARL2L1
Transcripts	ENSG00000169379
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	Q3SXY8
HGNC ID	HGNC:25419
VEGA ID	OTTHUMG00000159012
OMIM ID	608922
String ID	9606.ENSP00000377769
PharmGKB ID	PA134975272

Target gene [ARL13B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1010005	chr3	10	5		15	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of ARL13B expression and immune infiltrating cell level correlation result in HBV+ samples
ARL13B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).